Data Driven Research for Everyone
Galaxy is an open, web-based platform for accessible, reproducible, and transparent computational biological research.
- Accessible: Users can easily run tools without writing code or using the CLI; all via a user-friendly web interface.
- Reproducible: Galaxy captures all the metadata from an analysis, making it completely reproducible.
- Transparent: Users share and publish analyses via interactive pages that can enhance analyses with user annotations.
- Scalable: Galaxy can run on anything, from a laptop, to large clusters or the cloud.
The Freiburg Galaxy Team is offering several services to enable reproducible and accessible research for everyone:
We regularly provide workshops
But we cannot always meet capacity, so we've put all of our training materials online. This has become a community project with people from all over the world contributing training materials.
Topics include: variant analysis, transcriptomics, metagenomics, epigenetics, and many more!
We are aiming to maintain high competency and provide high-quality data analysis services to all our Galaxy users.
Therefore, we request that you acknowledge this service by including the members of the Freiburg Galaxy Team as co-authors if they have made a significant intellectual and/or organizational contribution to the work described (conceptualization, design, data analysis, data interpretation and/or input into drafting, revising or writing any portion of the manuscript).
Individuals who have contributed to the project, but whose contributions do not rise to the level justifying authorship, can be recognized in the acknowledgements section of the manuscript as follows:
The authors acknowledge the support of the Freiburg Galaxy Team: Person X and Prof. Rolf Backofen, Bioinformatics, University of Freiburg, Germany funded by Collaborative Research Centre 992 Medical Epigenetics (DFG grant SFB 992/1 2012) and the German Federal Ministry of Education and Research (BMBF grant 031 A538A de.NBI-RBC).
Additional funding of projects and/or provision of material expenses are welcome as well, to help support our growing Galaxy community in Freiburg.
Oct 18, 2021
Training Infrastructure Feedback from Dr. Theodora Tsirka
Oct 16, 2021
UseGalaxy.eu Tool Updates for 2021-10-16
Oct 13, 2021
BY-COVID: A new EU project for pandemic preparedness
Oct 12, 2021
UseGalaxy.eu Use Case: cellular specification, differentiation and morphogenesis of the mucociliary epithelium
Oct 11, 2021
UseGalaxy.eu Use Case: microRNAs in heart disease
Oct 8, 2021
A proteomics sample metadata representation for multiomics integration and big data analysis
Oct 22, 2021
How Galaxy Imaging makes cloud-based image analysis possible
Oct 22, 2021
The evolution of a Galaxy project for running hybrid events
Oct 28, 2021
Galaxy Developer Roundtable: Image analysis in Galaxy - pain points and lessons learnt
Nov 1, 2021
Single-Cell RNAseq Training Course 2021
Nov 4, 2021
Genome Annotation & Galaxy Large Data Handling workshop
Nov 8, 2021 - Nov 12, 2021