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  • About

Data Driven Research for Everyone

Galaxy is an open, web-based platform for accessible, reproducible, and transparent computational biological research.

  • Accessible: Users can easily run tools without writing code or using the CLI; all via a user-friendly web interface.
  • Reproducible: Galaxy captures all the metadata from an analysis, making it completely reproducible.
  • Transparent: Users share and publish analyses via interactive pages that can enhance analyses with user annotations.
  • Scalable: Galaxy can run on anything, from a laptop, to large clusters or the cloud.

UseGalaxy.eu home page

UseGalaxy.eu: The European Galaxy instance

  • Thousands of documented and maintained tools
  • Free registration
  • 250 GB per user (500 GB for ELIXIR members)
  • On-demand training capacity

And even more!

Domain-specific European Galaxies

UseGalaxy.eu hosts several domain-specific versions of the usegalaxy.eu server. You can access any of these servers and find data and tools focused on the following research areas:

africa.usegalaxy.eu
annotation.usegalaxy.eu
cheminformatics.usegalaxy.eu
climate.usegalaxy.eu
clipseq.usegalaxy.eu
covid19.usegalaxy.eu
ecology.usegalaxy.eu
erasmusmc.usegalaxy.eu
graphclust.usegalaxy.eu
hicexplorer.usegalaxy.eu
humancellatlas.usegalaxy.eu
imaging.usegalaxy.eu
metabolomics.usegalaxy.eu
metagenomics.usegalaxy.eu
microbiome.usegalaxy.eu
ml.usegalaxy.eu
nanopore.usegalaxy.eu
plants.usegalaxy.eu
proteomics.usegalaxy.eu
rna.usegalaxy.eu
singlecell.usegalaxy.eu
streetscience.usegalaxy.eu
virology.usegalaxy.eu

Training Infrastructure as a Service

We want to help you conduct your training seminars. You provide the training, we provide you training infrastructure at no cost.

Why use UseGalaxy.eu training infrastructure?

  • Free
  • Private queue, no wait times
  • No Galaxy Maintenance
  • No Galaxy Administration
  • Official Galaxy Training Materials guaranteed to work

Simply fill out the infrastructure request form and we'll get back to you shortly.

Training

We regularly provide workshops

But we cannot always meet capacity, so we've put all of our training materials online. This has become a community project with people from all over the world contributing training materials.

Topics include: variant analysis, transcriptomics, metagenomics, epigenetics, and many more!

Galaxy training materials page

Service Administration

The maintenance and administration of UseGalaxy.eu is done primarily by the Freiburg Galaxy Team in collaboration with other academic groups across Europe and with the US Galaxy team.

We make a best effort to provide high uptime. Please see our status page for more information.

The Freiburg Team tries to maintain a balance between service uptime and the health of the administrators behind the service.

Sometimes we are able to achieve this, sometimes due to factors outside our control, our service is temporarily inaccessible.

Downtime Notifications

We want you to feel that useGalaxy.eu is a reliable service, so we are promising to give you advanced warning (when possible) about upcoming downtimes or any events that might degrade the availability of useGalaxy.eu.

  • This is a best effort, as much warning as we possibly can.
  • But we cannot make any regarding downtime notices.
  • The numbers we provide here are rough estimates.
For any planned downtime events:
DowntimeAdvanced Notice
< 5 minutespossibly without notice
1 hour1 day
1 day1 week
1 week1 month

Our Data Retention Policy

Registered UsersUnregistered UsersFTP DataGDPR Compliance
User data on UseGalaxy.eu (i.e. datasets, histories) will be available as long as they are not deleted by the user. Once marked as deleted the datasets will be permanently removed within 14 days. If the user "purges" the dataset in the Galaxy, it will be removed immediately, permanently. An extended quota can be requested for a limited time period in special cases. Processed data will only be accessible during one browser session, using a cookie to identify your data. This cookie is not used for any other purposes (e.g. tracking or analytics). If UseGalaxy.eu service is not accessed for 90 days, those datasets will be permanently deleted. Any user data uploaded to our FTP server should be imported into Galaxy as soon as possible. Data left in FTP folders for more than 3 months, will be deleted. The Galaxy service complies with the EU General Data Protection Regulation (GDPR). You can read more about this on our Terms and Conditions.

Maintained by

Freiburg Galaxy Logo Galaxy Training Network Logo


Sponsors/Funding


de.NBI Logo DFG Logo MWK Logo BMBF Logo ELIXIR Logo

News

Feb 27, 2021

UseGalaxy.eu Tool Updates for 2021-02-27

Feb 25, 2021

Galaxy-ELIXIR webinar series: Open Data Infrastructures to tackle COVID-19 pandemic

Feb 22, 2021

Training Infrastructure Feedback from Mali Salmon-Divon

Feb 20, 2021

Login via ELIXIR-AAI, Google, LinkedIn, or your ORCID iD

Feb 20, 2021

UseGalaxy.eu Tool Updates for 2021-02-20

Feb 18, 2021

Meet & Join the Galaxy Community

Events

Oct 11, 2021

Workflow4Experimenters (W4E) international course 2021

Jun 28, 2021 - Jul 10, 2021

Galaxy Community Conference 2021

May 28, 2021

Comparaison de génomes microbiens

May 27, 2021

Annotation automatique de génomes bactériens

May 4, 2021

Analyse avancée de séquences

Apr 28, 2021

Galaxy introduction for life scientists

UseGalaxy.eu is maintained largely by the Freiburg Galaxy Team but also collectively by groups and individuals from across Europe. All of the member sites in this repository contribute to the European Galaxy Project. For acknowledgement, please refer to the About section. All content on this site is available under CC0-1.0 unless otherwise specified.

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