Site Topic/Event Starts Ends Location
Freiburg

2019 Galaxy Community Conference (GCC2019)

We are pleased to announce that GCC2019 will be held in Freiburg, Germany, 1-6 July. Like previous Galaxy Community Conferences, GCC2019 will feature invited keynotes, accepted talks, posters, and demos, birds-of-a-feather gatherings, multiple days of collaborative work, and plenty of opportunities to network with your fellow data-intensive researchers and practitioners. If you are working in data-intensive life science, there is no better place to be.

Jul 1, 2019 Jul 6, 2019 Freiburg im Breisgau, Germany
Freiburg

Galaxy HTS data analysis workshop in Freiburg

Galaxy beginner workshop on High-Throughput data analysis, February 2019, registration is open!

Feb 25, 2019 Mar 1, 2019 Freiburg im Breisgau, Germany
Freiburg

2019 Galaxy Admin Training

Galaxy Admin Training will be offered January 28 through February 1 at Penn State University, where the Galaxy Project got started over ten years ago. The workshop is split into a 2 day introductory session and a 3 day advanced topics session. Participants can register for one or both sessions.

Jan 28, 2019 Feb 1, 2019 Penn State, USA
Freiburg

Galaxy RNA-seq data analysis workshop in Belgrad

Galaxy workshop on RNA-seq data analysis, January 2018 in Belgrad (Serbia), registration is open! For attendance, or more information please visit their website

Jan 17, 2019 Jan 18, 2019 Belgrade, Serbia
Freiburg

Galaxy RNA-seq data analysis workshop in Freiburg

Galaxy workshop on RNA-seq data analysis, December 2018, registration is open! For attendance, please apply to

Dec 6, 2018 Dec 7, 2018 Freiburg im Breisgau, Germany
Freiburg

European Galaxy Days

The first day will give an overview of the current state of the Galaxy framework with several talks and demonstrations. The second day will focus on developing and extending the Galaxy ecosystem.

Nov 19, 2018 Nov 20, 2018 Freiburg im Breisgau, Germany
Freiburg

GTN CoFest on Training Material

The Galaxy Training Network has developed an infrastructure to deliver interactive training based on Galaxy: one central place (https://training.galaxyproject.org) to aggregate training materials covering many current research topics. Each topic is supported by different tutorials developed and maintained by the community via a GitHub repository: https://github.com/galaxyproject/training-material.

Nov 15, 2018 Nov 15, 2018
Erasmus MC

Elixir Biohackathon 2018

ELIXIR France with the support of the ELIXIR Hub and the ELIXIR interoperability platform and in collaboration with COST CHARME, the National Bioscience Database Center (NBDC) and the Database Center for Life Science (DBCLS), is organising a BioHackathon in November 2018 in Paris. This BioHackathon will complement and work in collaboration with the BioHackathon planned in Japan at the end of 2018.

Nov 12, 2018 Nov 16, 2018 Seine-Port (South Paris), France
Erasmus MC

NGS Introduction using Galaxy

Intended Audience

Nov 6, 2018 Nov 6, 2018 Gent, Belgium
Erasmus MC

Bioinformatics for Translational Medicine using Galaxy: see it, do it, teach it!

Analysing molecular data in translational medicine involves a multitude of computational steps. Here, we introduce the basics of how to design and run these steps within Galaxy, a free and easy-to-use web platform that enables users to connect bioinformatics tools into a workflow without any prior programming expertise.

Oct 17, 2018 Oct 19, 2018 Amsterdam, The Netherlands
Freiburg

Galaxy HTS data analysis workshop in Freiburg

Galaxy workshop on HTS data analysis, September 2018, registration is open! For attendance, please apply here

Sep 17, 2018 Sep 21, 2018 Freiburg im Breisgau, Germany

RNA-Seq data analysis with Galaxy for clinical applications

The registration for the Galaxy training on RNA-Seq analyses and clinical applications (September 2018) is open! For the program and registration, please check the English and German announcements.

Sep 4, 2018 Sep 4, 2018 Osnabrück, Germany
Erasmus MC

Next Generation Sequencing data analysis, LUMC

This course aims at PhD students, postdocs and senior researchers who are interested in planning, or already working with next-generation sequencing. We welcome researchers from both the genomics and bioinformatics fields. Currently available technologies as well as hardware solutions will be presented and discussed. The focus of the course will be on data and ways to analyse the data.

Aug 27, 2018 Aug 29, 2018 Leiden, The Netherlands
Erasmus MC

GTN CoFest on Metagenomics Training Material

The Galaxy Training Network has developed an infrastructure to deliver interactive training based on Galaxy: one central place (https://training.galaxyproject.org) to aggregate training materials covering many current research topics. Each topic is supported by different tutorials developed and maintained by the community via a GitHub repository: https://github.com/galaxyproject/training-material.

Aug 17, 2018 Aug 17, 2018
Erasmus MC

System Administrator Appreciation Day

Your network is secure, your computer is up and running, your printer is jam-free, and your Galaxy histories are green. Why? Because you’ve got an awesome sysadmin (or maybe a whole IT department) keeping your business up and running. So say IT loud; say IT proud … Happy SysAdmin Day!

Jul 27, 2018 Jul 27, 2018

A Primer for RNA-Sequencing Processing, Interpreting and Visualization in Jena

de.STAIR is offering an introductory course on RNA-Sequencing data analysis using the Galaxy platform. For attendance, please apply here

Jun 27, 2018 Jun 29, 2018 Jena, Germany
Erasmus MC

Galaxy Community Conference / BOSC

The 2018 Galaxy Community Conference (GCC2018) and Bioinformatics Open Source Conference 2018 (BOSC2018) are meeting together in Portland, Oregon, United States, June 25-30, 2018. There will be two days of training, a two+ day meeting, and four days of intense collaboration. The meeting features joint & parallel sessions, shared keynotes, poster & demo sessions, birds-of-a-feather, and social events. GCCBOSC is organized by Oregon Health & Science University and will be at Reed College.

Jun 26, 2018 Jul 2, 2018 Portland, USA
Freiburg

Galaxy Community Conference and Bioinformatics Open Source Conference

This year, the Galaxy Community Conference and Bioinformatics Open Source Conference are joining together for a unified event to be held in Portland, Oregon, United States, June 25-30, 2018.

Jun 25, 2018 Jun 30, 2018 Portland, USA
Freiburg

ELIXIR 2018 All Hands

The fourth ELIXIR All Hands meeting will take place 4 -7 June 2018 in Berlin

Jun 4, 2018 Jun 7, 2018 Berlin, Germany
Freiburg

CarpentryCon

The first CarpentryCon will be held in Dublin. CarpentryCon is the key community-building and networking event in The Carpentries’ annual calendar of activities. This event will bring together newer and more experienced Carpentry community members to share knowledge, to network, to develop new skills, and to develop strategies for building strong local communities.

May 30, 2018 Jun 1, 2018 Dublin, Ireland
Freiburg

Workshop for Galaxy training material and skills improvement

Following the success of the last year Cambridge hackathon, the Galaxy Training Network organizes a three-day “Workshop for Galaxy training material and skills improvement”, hosted in Norwich in May 2018.

May 21, 2018 May 23, 2018 Norwich, UK
Freiburg

Galaxy Africa

The first Galaxy conference will be held in Africa, in Cape Town. It is an opportunity to learn from leading bioinformaticists, systems administrators and engineers about Galaxy and accessible, reproducible analysis of biological data.

Apr 3, 2018 Apr 5, 2018 Cape Town, South Africa
Freiburg

Galaxy User Conference

The Freiburg Galaxy team will organize a local Galaxy User Conference from 15th to 16th of March 2018, and we would like to invite you all.

Mar 15, 2018 Mar 16, 2018 Freiburg, Germany
Freiburg

ELIXIR Galaxy kick-off meeting in Freiburg

We are happy to announce that we are hosting the ELIXIR Galaxy community kick-off meeting here in Freiburg. ELIXIR members meet at 14.03.2018 starting from 13:00 at the technical faculty of the University of Freiburg. Everyone is invited to join, but please let us know so that we can plan accordingly. More information you can found here.

Mar 14, 2018 Mar 14, 2018 Freiburg im Breisgau, Germany
Freiburg

Galaxy HTS data analysis workshop in Freiburg

Galaxy workshop on HTS data analysis, February 2018, registration is open! For attendance, please apply here.

Feb 26, 2018 Mar 2, 2018 Freiburg im Breisgau, Germany
Freiburg

European galaxy administrator workshop in Norway

We will have a talk and will give a workshop on the European galaxy administrator workshop. For more information and registration see here.

Jan 8, 2018 Jan 12, 2018 Oslo, Norway
Freiburg

VRE deployment workshop

On Monday 04.12.2017 the Rechenzentrum of the University of Freiburg is hosting an introductory workshop on creation, usage, maintenance and sharing of Virtual Research Environments (VRE). The focus is on Neuroscience-related software (e.g. NEST, Neuron, Tensorflow, Python) but the methods and examples presented can be applied to other scientific fields as well.

Dec 4, 2017 Dec 4, 2017 Freiburg, Germany
Freiburg

Practical computational reproducibility in the life sciences

Björn will give two talks in Heidelberg about reproducible science.

Nov 30, 2017 Nov 30, 2017 Heidelberg, Germany
Freiburg

ViCE Workshop on Provisioning of Virtual Research Environments and Data Management

In this ViCE workshop we will give a talk and introduce Conda, Docker, and VMs.

Nov 6, 2017 Nov 6, 2017 Freiburg im Breisgau, Germany
Freiburg

de.NBI Symposium

At the de.NBI Symposium in Heidelberg, we will give a talk about the HiCExplorer and present a poster about bioinformatics online training.

Oct 19, 2017 Oct 24, 2017 Heidelberg, Germany
Freiburg

Software Carpentry Workshop

We will attend in the software carpentry workshop in Heidelberg and give a talk there about Galaxy.

Oct 18, 2017 Oct 20, 2017 Heidelberg, Germany
Freiburg

MetaboFlow

We will attend the Wellcome Trust funded MetaboFlow meeting (training and hackathon) in Birmingham and give training courses there on day one, and work together all the participantsto Galaxify existing metabolomics tools and workflows on day two.

Oct 16, 2017 Oct 17, 2017 Birmingham, UK
Freiburg

BioContainers Hackathon

In Paris, there will be the BioContainer hackathon. We will be there and take part.

Oct 9, 2017 Oct 10, 2017 Paris, France
Freiburg

A Primer for RNA-Seq Processing, Interpretation and Visualization

A Primer for RNA-Seq Processing, Interpreting and Visualization, October 2017, registration is closed!

Oct 4, 2017 Oct 6, 2017 Freiburg im Breisgau, Germany
Freiburg

de.NBI Summer School 2017 - Computational genomics and RNA biology

Together with the other RBC partners, we will organize the de.NBI summer school 2017 in Berlin. The RBC Freiburg will give a workshop on “Computational genomics and RNA biology”.

Sep 25, 2017 Sep 29, 2017 Berlin, Germany
Freiburg

Bioinformatics Galaxy workshop

Registration is open! Apply here.

Sep 18, 2017 Sep 22, 2017 Freiburg im Breisgau, Germany
Freiburg

Bioconda, BioContainer & Galaxy: enabling sustainable bioinformatic infrastructure

We will give a talk about Bioconda, BioContainer & Galaxy at the BFSS2017 at Herzogenhorn.

Jul 25, 2017 Jul 25, 2017 Herzogenhorn Feldberg, Germany
Freiburg

BOSC

We will give two talks on the BOSC about tool deployment and bioinformatics training.

Jul 22, 2017 Jul 23, 2017 Prague, Czech Republic
Freiburg

ISMB/ECCB

We will give a workshop on the ISMB/ECCB on “Making Galaxy Work for You”. Furthermore, we will present a poster there about the Training Network.

Jul 21, 2017 Jul 23, 2017 Prague, Czech Republic
Freiburg

Galaxy Community Conference (GCC) 2017

At the most important conference for the Galaxy community, we will present different talks and a poster, and we will give several workshops.

Jun 28, 2017 Jun 29, 2017 Montpellier, France
Freiburg

Repro Hackathon

We will take part in the Repro hackathon. If you like to join, find more information here.

Jun 1, 2017 Jun 2, 2017 France
Freiburg

ELIXIR/GOBLET/GTN hackathon for Galaxy training material re-use

The aim of the ELIXIR/GOBLET/GTN hackathon for Galaxy training material re-use is to extend and improve the content of the Galaxy Training material repository

May 22, 2017 May 24, 2017 Cambridge, UK
Freiburg

de.NBI - ELIXIR AAI Codefest - Make your services accessible via ELIXIR AAI

We will be hosting a hackathon in Freiburg with international guests.

Apr 4, 2017 Apr 5, 2017 Freiburg im Breisgau, Germany
Freiburg

GCB 2017

We will attend the German Conference of Bioinformatics (GCB) and present 2 posters there on bioinformatics training and ASaim!

Mar 28, 2017 Mar 28, 2017 Tübingen, Germany
Freiburg

MIRACUM webinar

The University of Freiburg is partner of MIRACUM, a projects which received €32.1 Mio funding for the German Medical Informatics Initiative (MI-I). Björn will give a webinar about Bioconda for all MIRACUM partners.

Mar 28, 2017 Mar 28, 2017
Freiburg

ELIXIR webinar Bioconda and BioContainers

Björn will give an ELIXIR webinar on Bioconda and BioContainers.

Mar 15, 2017 Mar 15, 2017
Freiburg

Software Carpentry workshop

We are happy to announce the first Software Carpentry workshop in Freiburg.

Mar 9, 2017 Mar 10, 2017 Freiburg im Breisgau, Germany
Freiburg

Bioconda & BioContainers

We are active contributors to Bioconda and BioContainers. In Tübingen, we are invited to give a talk about that.

Feb 23, 2017 Feb 23, 2017 Tübingen, Germany
Freiburg

Data analysis with Galaxy 2017/1

The Bioinformatics and Deep-Sequencing Unit at the MPI-IE Freiburg and the Bioinformatics group at the Department of Computer Science, ALU, offer an introductory course to the analysis of high-throughput sequencing data using the Galaxy platform.

Feb 13, 2017 Feb 18, 2017 Freiburg im Breisgau, Germany
Freiburg

GAMe - Galaxy Australasia Meeting

We are invited to Galaxy Australasia Meeting in Melbourne. Björn will give different training courses about HTS data analysis and several admin workshops there.

Feb 2, 2017 Feb 9, 2017 Melbourne, Australia
Freiburg

Galaxy RNAseq and admin workshop

We are invited to give a 1-day-workshop on RNAseq data analysis followed by a workshop for admins in how to set up a Galaxy instance in Mainz.

Jan 26, 2017 Jan 27, 2017 Mainz, Germany
Freiburg

European Galaxy Developer Workshop

The European Galaxy Developer Workshop is about integration and deployment of high-quality tools and visualizations into Galaxy, configuration of a production-ready Galaxy server, Docker, and Conda.

Jan 16, 2017 Jan 19, 2017 Strasbourg, France
Freiburg

Galaxy QIIME codefest

QIIME = quantitative Insights Into Microbial Ecology

Jan 9, 2017 Jan 10, 2017
Freiburg

Galaxy admin meet up

We will give a talk in the webinar for the Galaxy admin meet up.

Dec 16, 2016 Dec 16, 2016
Freiburg

Galaxy Workshop specialized on RNA-sequencing data analysis

Registration is open! Apply here

Dec 15, 2016 Dec 16, 2016 Freiburg im Breisgau, Germany
Freiburg

3rd Systems Biology Developers Foundry by FAIRDOM & de.NBI

We will give a workshop at the 3rd Systems Biology Developers Foundry organised by FAIRDOM & de.NBI. More information can be found here.

Dec 1, 2016 Dec 2, 2016 Frankfurt am Main, Germany
Freiburg

Introduction to Galaxy

In November, we will host scientists from Research Core Unit Transcriptomics Hannover for 2 days in Freiburg and introduced Galaxy in talks and workshops.

Nov 20, 2016 Nov 21, 2016 Freiburg im Breisgau, Germany
Freiburg

International de.NBI-Symposium "Bioinformatics for Human Health & Disease"

We will attend the de.NBI symposium with a talk in Heidelberg.

Nov 7, 2016 Nov 9, 2016 Heidelberg, Germany
Freiburg

Bioconda Contribution Fest

We will contribute to a hackathon within the Combined CHARME – EMBnet and NETTAB 2016 Workshop in Rome.

Nov 2, 2016 Nov 3, 2016
Freiburg

Reproducibility, standards and SOP in bioinformatics

We will give a talk and contribute to a hackathon within the Combined CHARME – EMBnet and NETTAB 2016 Workshop in Rome.

Oct 24, 2016 Oct 26, 2016 Rome, Italy
Freiburg

Swiss German Galaxy Workshop

In Freiburg, we will organize the “Swiss German Galaxy Tour/Day 2016”. On the first day, the 3rd Swiss German Galaxy Workshop will take place, on the 2nd day, we will have the 2nd German Galaxy Developer workshop.

Oct 20, 2016 Oct 21, 2016 Freiburg im Breisgau, Germany
Freiburg

The Galaxy Training Network contribution fest

The Galaxy Training Network (GTN) is inviting for a contribution fest to consolidate our training material on 6-7th October 2016. More information can be found here https://github.com/galaxyproject/training-material/issues/58.

Oct 6, 2016 Oct 7, 2016 Freiburg im Breisgau, Germany
Freiburg

Galaxy training material hackathon

We will contribute to the “Galaxy training material hackathon”. More information can be found here.

Oct 6, 2016 Oct 7, 2016
Freiburg

GalaxyP & Conda packaging hackathon

We will contribute to the Galaxy P and conda packaging hackathon. If you want to contribute as well, find more information here.

Sep 27, 2016 Sep 28, 2016
Freiburg

Galaxy workshop on HTS data analysis

We will offer one more Galaxy workshop on HTS data analysis in 2016!

Sep 19, 2016 Sep 23, 2016 Freiburg im Breisgau, Germany
Freiburg

GCB 2016

We will give a talk at GCB 2016. More information can be found here.

Sep 13, 2016 Sep 15, 2016 Berlin, Germany
Freiburg

Analyze more, process less: Galaxy in Freiburg

We will give a talk about Galaxy at the BFSS2016 at Herzogenhorn.

Sep 13, 2016 Sep 13, 2016 Herzogenhorn Feldberg, Germany
Freiburg

European Conference on Computational Biology (ECCB) 2016

On the ECCB 2016 we will give a talk. More information can be found here.

Sep 3, 2016 Sep 7, 2016 The Hague, Netherlands
Freiburg

HEC Bioinf workshop 2016

We will give a talk and a workshop about Galaxy for biomedical research.

Sep 1, 2016 Sep 1, 2016 Munich, Germany
Freiburg

RBC kick-off meeting & hackathon

Members from de.NBI RBC and RBC partner projects will introduce their techniques, e.g. git, conda, Galaxy, Docker, ansible, Flavours and teaching.

Jul 25, 2016 Jul 27, 2016 Freiburg im Breisgau, Germany
Freiburg

Galaxy Community Conference (GCC) 2016

We will give 2 talks and 6 workshops at the GCC2016 in Indiana, USA. If you want to participate, please find more information here.

Jun 25, 2016 Jun 29, 2016 Bloomington, US
Freiburg

MIOSS 2016

We will have a presentation about the ChemicalToolBox at the EMBL/EBI in Cambridgeshire, UK. More information you can find here.

May 18, 2016 May 19, 2016 Cambridgeshire, UK
Freiburg

HPC workshop

Björn will give a workshop on high-performance computing in Oslo.

Apr 18, 2016 Apr 19, 2016 Oslo, Norway
Freiburg

Galaxy DevOps workshop

More information can be found her

Apr 6, 2016 Apr 7, 2016 Heidelberg, Germany
Freiburg

Conda workshop

We will contribute to the online hackathon of conda.

Apr 4, 2016 Apr 4, 2016
Freiburg

Hackathon on RADseq Tools and Workflows

The IUC will organise a contribution fest dedicated to RADseq tools and workflows. A lot of fun - especially with Yvan and his team mates :)

Mar 8, 2016 Mar 8, 2016
Freiburg

Galaxy workshop on HTS data analysis

We are offering another Galaxy workshop on HTS data analysis in February 2016!

Feb 22, 2016 Feb 18, 2016 Freiburg im Breisgau, Germany
Freiburg

de.NBI - EDAM Codefest: ELIXIR Tools and Services Registry Resource hackathon

This hackathon is organized by de.NBI and ELIXIR and will take place in Freiburg. It will include status talks of the ELIXIR Registry, Tool Sheds and Galaxy.

Jan 19, 2016 Jan 20, 2016 Freiburg im Breisgau, Germany